You didn't say if you sanded all the old paint off, down to gelcoat, or just smoothed the old bottom paint.
If the boat was brand new, or had never had it's bottom painted, you'd want to use a de-waxer or acetone to remove any residual mold wax. Because your boat has been painted before, I'll assume the mold wax is no longer a problem (or the old bottom paint wouldn't have adhered). So, regardless of whether you're down to bare gelcoat, or just smoothed out the the old paint, you're ready to simply apply paint. Of course, if you haven't removed all the old paint, you'll want to be sure to select a paint that's compatible with the old paint.
If you went all the way down to bare gelcoat, then now would be the time to seriously consider applying a two part epoxy barrier coat like Interlux, prior to applying your bottom paint. If you're not familiar with that, you'll find plenty of info online.