Plans for manual engine driven DIY watermaker:
http://sites.google.com/site/llichtveld/newpage
There used to be a $15 charge for these plans but apparently they're now offered free.
As one who was deeply involved in membrane technology and the engineering of such membrane systems for complicated chemical processes what Lichtveld outlines is 'spot on', although some of his listed components are now obsolete by their respective manufacturers.
I do serious long term long distance cruising and into the desert islands of the Northern Carrib. and the desolate S. Bahamas where you really need a watermaker if you want to stay in that area for any amount of time, as theses islands dont have wells or the wells are all 'brackish'. With such a manual system (requires a human brain to operate) you can easily DIY build such a system for $1200-$1800 and have a high capacity output. The only advice that I will add to the Lichtveld design is to be sure have a 'continuous duty' rated supply pump to the high pressure pump, not a 1 hour rated pump with a thermal cut-out because if that thermal switch comes on and stops the supply pump it will 'starve the hi pressure pump and instantly destroy it - the costliest component of the system. If you want real high quality, select a high pressure pump with bronze piston heads - less need to flush out the system with product water to flush out the seawater when finished making RO water.
For my personal usage I always add a pharmaceutical grade 0,2µM (100%) filter set downstream of the RO and before the water goes to the storage tank to prevent biological contamination that passes through the RO membrane. For surety and safety you only use a RO system in clean/clear water ... never in a harbor or when near a high concentration of anchored boats or near cities or large towns as RO membranes are not 'valid' to remove 'all' bacteria, etc.
BTW - you only get ~18 months out of an RO membrane, whether you use it all the time or not.