Ok, it wouldn't start. Have you checked spark? Have you pumped fuel out of the tank, through the filter into a clear container to check fuel flow and potential contaminant (water)? We need some feedback to form some idea of what's happening. Right now, I'm still at air, fuel, or spark? I don't think I have any info to rule out or confirm any of the three are your issue. Sorry you're having such a bad run. Trust me, you're not alone.
Is it gas or carb? Right now, don't have a clue that it's either.
Will leaving bad gas in it till end of season clog the carb? If that's the problem, it depends on what "bad" means. If it's marine gas with water in it, and your separator didn't stop the water, the carb could be ruined by corrosion if you let it sit with water in the bowl.
How do you get rid of 12 gallons of bad fuel? Depends on why it's bad. If it's water, I'd pour the fuel off and use it in my lawnmower. Maybe put the last bit on anthills, or find somewhere that would take it. Last resort would be burning it in very small amounts at a time. But, I am from Alabama...