The difference is
in the batteries charging capacity. A Deep Cycle is intended or constructed to be almost completely discharged and recharged many times. As you probably know, boat owners usually use this battery for operating onboard lights and systems when the engine is not running. Whereas, a cranking battery is and should be maintained at its optimum voltage and amperage rating. The alternator on your engine takes care of doing this. Its primary usage is as the name implies--to start the engine. There are many technical reasons and explainations related to these two types of batteries. However, I would not rely upon a cranking battery to operate onboard systems. It will not hold up over time, but a deep cycle will. You can find deep cycle batteries at almost any store where batteries are sold. These tend to be less expensive at automotive or discount stores. Nonetheless, the extra you might pay for a "good" deep cycle battery will benefit you in the long run.