Tough question on "how clean is the water where the oysters are?". I don't think that it's bad, it could be better. I have no problems with eating fish or shellfish out of the local waters or from just behind the house. I am attaching a picture and you can see that we are located almost straight across the bay from the mouth of the bay and it "flushes" twice. After I wrote my reply the other day, I went down to the oysters and grabbed a couple and threw them on the smoker (which I was smoking a pork shoulder on) directly above the heat and ate my first oysters of the season, they were very healthy looking, plump and tasty. Not quite as salty as oysters from the Eastern Shore (Atlantic Side) but still had a bit of saltiness to them. One had a little oyster crab inside, they live inside the shells with the oysters but do not eat/kill the oysters. I was told by the company that I get my oyster seed from that they are a sign of good salinity. Oyster crabs are considered a delicacy for real oyster lovers (
http://query.nytimes.com/mem/archive-free/pdf?_r=1&res=9F07E5D6133FE633A2575AC0A9679D946296D6CF). The higher salinity in our area indicates (to me) that a good amount of "flushing" action takes place with the waters in our area with "fresh" ocean water so I do think that the water quality is pretty good here, up the rivers not so much I would think.
Anyway, the oysters tasted great! Eating them was as much a "Test of their healthiness" as a treat... I might have to start testing on a more frequent basis

. Nice thing about them being where they are is that if I am already grilling or something, I can just go grab a couple and throw them on the grill (my favorite way to eat them). If I bother to shuck them (for company usually) I put a little garlic and parmesan on them and then grill them, otherwise they taste great in their own juices. Because of the condition of the Bay I typically do not eat them raw, though I have and probably will again, but it is not often and is usually in December when there is significantly less activity on the bay (this may be more of a mental thing though). I plan on buying several thousand more seed next month.
Maybe I could do a wiki or something on oyster gardening if there isn't one out there already, but I am not an expert. All of my knowledge on the subject has either been learned from the internet, the company I buy the oysters from, or just trying it out and seeing what works. When I was researching how to do this, it seemed that though there is information out there, I had a hard time finding a lot of more technical or scientific information. A very good resource to start is
http://www.deq.virginia.gov/coastal/gardening.html
Disease is something I would like to know more about. I think there are really two primary diseases that are detrimental to the oyster population (MSX and Dermo) I think they are actually parasites, not disease and from what I understand, they will wipe out entire populations of oysters. I think that "planting" oyster seed in the colder months is recommended because MSX and Dermo are not prevalent in those months and it give the oysters time to adjust to their location and strengthen, whereas planting in the warmer months when the oysters are using their energy to reproduce increases their vulnerability to the parasites. Both MSX and Dermo are not harmful to humans.
I would also like to know what the normal mortality rate of oysters should be out of say 1000 count. I get some dead ones, not at a terrible rate, and probably more due to having too many in each cage and they must compete for food, but I do wonder about Dermo and MSX. Ross said something about hoping that by letting oysters mature and reproduce perhaps the population would become more resilient to the diseases (seems to be working with MSX, but not
yet with Dermo). Good reading on the topic that I went to as writing this:
http://www.deq.virginia.gov/coastal/documents/referencea.pdf
Sorry for writing so much, wonder if anyone really cared to read through all of this. It's just near and dear and I really do feel that improving the condition of the Bay depends on many things, but restoration of the Oyster population is a key component and one must not sacrifice enjoying eating oysters to accomplish it. I am not a biologist, but if I knew then what I knew now, I might have pursued that course of study in my younger years. I often times think about raising oysters as my retirement job. I'll try to take some pictures of them this weekend if anyone wants and post them. I would think that those with boats slipped at a marina could do something similar in their slip, but I would worry about someone taking them so a little obscurity would be prudent. I made my floats and cages myself and there is no reason that it needs to float, so if a cage was suspended or resting on a hard bottom or some sort of support to keep it from sinking in muck would be fine and keep them out of view. Below is that picture showing where our oysters are raised and it's relation to the mouth of the bay for salinity and water condition (flushing of the bay).