You have problems you don't even know about!
Starting with, a previous owner has apparently connected a toilet designed to use raw water to the potable fresh water system....'cuz that's not the way any marine toilet I know of is designed to flush. That's a MAJOR no-no. No marine toilet that isn't specifically designed to use pressurized water should ever be connected to the fresh water system 'cuz there's no way to do it without risk of polluting the fresh water supply, damage to the toilet...or both. So whatever is backing up your toilet, the first thing you have to do is convert it back! Replacing the toilet may make more sense.There are several possible reasons why your toilet won't flush...the most obvious is a blocked holding tank vent, creating backpressure. Other possibilities (none of which include anything to do with a vented loop...sorry, JB):Low voltage to the toilet due to corroded connections, a weak battery, too far from the battery, wire size too small. Put a volt meter on it while you flush it...if it's not reading the full 12v, you have low voltage.If you're in salt water, sea water calcium carbonate buildup in the head discharge hose can reduce the hose diameter enough to create enough backpressure to back up the toilet. It can be dissolved, but since I suspect the only sensible way to solve ALL your problems is a new toilet, new hoses too would be the easiest way to cure it.A long uphill run to the tank would allow some runback, but it should only be clean flush water, there shouldn't be any waste in it.The toilet may need rebuilding...rebuild kits include a joker valve that goes in the head discharge...and the last thing you need is another one. Or the toilet may just be worn out..everything has a lifespan. Do you have a clue what the make/model/age is?