This is a complicated question. Our own Maine Sail has recently completed an article for Practical Sailor regarding batteries, charging methods, and how to properly manage your DC system. You should subscribe.
I did recently switch from FLA to AGM, BUT only after replacing my OEM charger with an improved, state-of-the-art MasterVolt BC, that includes adjustable 3-stage charging points, and temperature compensation. I moved my house batteries out of the hot engine compartment too. I also keep my boat in a slip, plugged up to shore power, and have the ability to quickly, and completely recharge my battery pack from a PSOC condition (AC GenSet). If that doesn't sound like something you can pull off, stay with inexpensive disposable FLA golf cart batts, and begin with improvements to your charging and charge control devices.